Publications

Tang, X., & Liu, R. (corresponding author) (2025). De-motif sampling: an approach to decompose hierarchical motifs with applications in T cell recognition. Briefings in Bioinformatics, 26(3), bbaf221. https://doi.org/10.1093/bib/bbaf221

Liu, R., Hu, Y., Huang, J., & Fan, X. (2023). A Bayesian approach to estimate MHC-peptide binding threshold. Briefings in Bioinformatics, 24(4), bbad208. https://doi.org/10.1093/bib/bbad208

Liu, R., Hu, Y., Du, J., Zhang, B., Yau, T., Fan, X., & Huang, J. (2023). Family-specific training improves linear B cell epitope prediction for emerging viruses. IEEE/ACM transactions on computational biology and bioinformatics, 20(6), 3669–3680. https://doi.org/10.1109/TCBB.2023.3311444

Liu, R., Tang, X., Fan, X. Sequence interaction model with applications to TCR-peptide binding, under review at The Annals of Applied Statistics.

Tang, X., & Liu, R. (corresponding author) GAMMA: Gap-aware motif mining under incomplete labeling with applications to MHC motifs, under review at Briefings in Bioinformatics.